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Additional Viral Recombination and Other Risks in Transgenic Crops

( The address of this page is www.btinternet.com/~nlpwessex/Documents/gmviral.htm )


In addition to the common use of the CaMV viral promoter in the majority of transgenic plants, some GM plants are also modified with the intention that they gain protection from attack from viruses in the environment. A number of such crops are already being released into the environment in some parts of the globe.

However, the scientific literature reveals that such crops can also be susceptible to recombination and other events which may enable the creation of new viral diseases. The literature confirms that it may be very difficult to prevent such phenomena when GM crops of this type are released into the environment.

The following extracts from Hull R. (1998) Detection of risks associated with coat protein transgenics. In: Methods in Molecular Biology: Plant Virology Protocols: from Virus Isolation to Transgenic Resistance (Eds: Foster G.D., Taylor S.C.). New Jersey, Humana Press Inc. 81, 574-555, form part of an assessment of the nature of these risks, pointing out that compared to laboratory situations monitoring and detection of such phenomena in the case of large-scale field-releases "will be much more difficult, if not impossible."

The author of the paper is Professor Roger Hull, of the Department of Virus Research at the John Innes Centre, UK.


[Extracts from paper]

1. Introduction

"Recent advances in the understanding of the molecular mechanisms of how viruses function and how they interact with plants have led to the development of various nonconventional approaches to protection of plants against viruses. Many of these approaches involve the introduction of viral or virus-based sequences into the plant's genome....

Many of these transgenic plant lines... have reached the stage of field testing for the efficacy of protection, and are even being more generally field-released. This raises the question of possible risks that could arise on general field release, a topic which has previously been discussed by Hull (5-7), Hull and Davis (12), de Zoeten (17), and Tepfer (18).  Depsite these discussions, the issue has not been fully resolved, and various other aspects are being raised.....

1.1 Potential Risks on Field Release

".......The area of concern specific to viral transgenes is the potential risks on any interactions between the viral or virus-related sequences being expressed from the transgene and another virus superinfecting that plant. Three main scenarios are usually considered: synergism, recombination and heteroencapsidation........

1.3. Recombination

Three sorts of recombination have been recognized (20): homologous with crossovers between related RNAs at precisely matched sites, aberrant homologous with crossovers between related RNAs not at corresponding sites, and nonhomologous with crossovers between unrelated RNAs at noncorresponding sites. There is considerable evidence for extensive recombination in RNA viruses (see refs. 20 and 21 for details), and probably all three mechanisms have been involved at one time or another. It is generally considered that recombination plays an important role in the evolution of RNA viruses (see
refs. 20—23). Evidence is now forthcoming of recombination between superinfecting viral RNA and RNA expressed from a transgene (24) through the aberrant homologous recombination mechanism. The finding of recognizable host RNA sequences within viral RNAs (25,26) is suggestive of nonhomologous recombination.

All the experimentation on recombinants between plant virus sequences has been done in controlled laboratory situations. It is difficult to devise detailed protocols for the detection of recombinants produced in the field.....

1.4. Heteroencapsidation

This involves the superinfection of a plant expressing the CP of a virus, say virus A, by an unrelated virus B. Heteroencapsidation is the encapsidation of the genome of virus B by the CP of A, thereby conferring on virus B properties of virus A. There are several examples of heteroencapsidation in transgenic plants, both between viruses of the same group (27,28), and between unrelated viruses (29). The main property of CP that is considered is that of vector transmission characteristics. However, there is increasing evidence that CPs are involved in long distance viral movement around infected plants, and heteroencapsidation could enhance the movement of a superinfecting virus that did not normally move systemically (see Subheading 1.2.).

The discussion of heteroencapsidation has focused on superinfecting viruses. However, there is the possibility that heteroencapsidation of retrotransposons could present a problem. Retrotransposons are a major class of transposable elements whose structure resembles the integrated copies of retroviruses, and which are considered to be important in evolution (see ref. 30). The Tyl-copia group of retrotransposons is widespread in plant genomes (31—33), and it has been suggested that there might be horizontal transmission between species (31). Sequencing has shown that most copies of the Tyl-copia retrotransposons in plants are mutated, so they would not be active. However, several active ones capable of retrotransposition have been described (30,34—37) and presumably replicate, as do all retrotransposable elements, via RNA. Among the factors that activate plant retrotransposons is tissue-culture, a process involved in transformation (37). This raises the possibility that introduction of the CP transgene could activate retrotransposon RNA, which becomes heteroencapsidated and transmitted horizontally to other species."

1.5 Risk Reduction and Control

"The main question to be addressed is whether the risk on field release of the transgenic plant is significantly more than the risk from the nontransgenic plant ....

It is likely that it will take some time for a full risk assessment on the viral transgenic plants to be performed and commercial and other pressures will be very strong for field release. There are two approaches to risk reduction and control that can be put into effect relatively soon. One is to use biological containment [to control heteroencapsidation].......Much more difficult is to avoid recombination. ......

"The second approach is to design methods for monitoring the effects of field release. For small-scale releases, it is relatively easy to design monitoring procedures for analyzing pollen flow into related weed species and for detecting heteroencapsidants or recombinants. This will be much more difficult, if not impossible, for large-scale releases, in which the approach should be to educate farmers and extension service personel to identify any unusual event that might be associated with transgenic plants. This will be the challenge for the future."


Evidence (1999) that a plant virus switched hosts to infect a vertebrate and then recombined with a vertebrate-infecting virus
Additional risks associated with crops incorporating viral transgenes
identified by Monsanto and USDA Scientists


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